Pastor Jeff is the one who destroys George and Mary's marriage in Young Sheldon, not Pastor Rob . The Cooper parents' marriage has been in a gradual downward spiral for a while now due to the pair's inherent differences. Now, it may be taking a turn for the worse, but while Pastor Rob is easy to blame for Mary and George's Young Sheldon problems, Pastor Rob is actually more responsible for their issues.
Currently, The Big Bang Theory spinoff is focused on Georgie (Montana Jordan) after he and his girlfriend, Mandy (Emily Osment), became pregnant. This big development has impacted all members of the Cooper family, including George Sr.
Other people's unsolicited opinions have made things harder for the Coopers. Mary's reliance on Pastor Rob (Dan Byrd) has been particularly frustrating for George. That being said, while it's easy to pin this on Rob, the blame for destroying the couple's marriage should be put on Pastor Jeff (Matt Hobby). In the Young Sheldon season 5 penultimate episode, Pastor Jeff decided to fire Mary from her job at the church to keep the congregation from talking about her and her family.
Disappointed with Pastor Jeff's actions, Mary continues to ruminate about his decision in the hopes that it will make sense to her instead of simply accepting that he has turned his back on her.
Mary's refusal to let go of her ties to the church and prioritize her family is also the reason for her continued association with Pastor Rob since he's her former co-worker and confidante. They technically haven't done anything wrong, but they're both aware that there's a mutual attraction between them. Hopefully, Mary starts focusing on what she needs to do given her circumstances in Young Sheldon, and the only way to do that is to accept that Pastor Jeff has essentially abandoned her.